PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022962268.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HB-other

Protein Properties

Length: 465aa MW: 51584.6 Da PI: 5.4002

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022962268.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.4	9.9e-08	402	435	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 + +yp++e++++L +++gL+ +q+ +WF N+R + XP_022962268.1 402 NWPYPTEEDKAKLVQETGLQLKQINNWFINQRKR 435 469*****************************87 PP

Sequence ? help Back to Top
Protein Sequence Length: 465 aa Download sequence
MAFRNQLSQD LPLHYENQSQ PERPLSDNTL RSILSDQLTD HSPADDGSKP EHPLQSTPNW 60 LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH 120 SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGVN NSDDVAVESD GNEGAYGGDA 180 AMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG 240 HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS 300 PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL 360 KNQGYKEKIL DIREEILRKR RAGKLPGDTT SVLKAWWQSH SNWPYPTEED KAKLVQETGL 420 QLKQINNWFI NQRKRNWHTN PSTSTTLKTK RKRSNAGEAT GNNHP

Sequence ? help Back to Top

Protein Sequence Length: 465 aa Download sequence

MAFRNQLSQD LPLHYENQSQ PERPLSDNTL RSILSDQLTD HSPADDGSKP EHPLQSTPNW  60
LNSALLRNQA PHSHFSDETT ATAADNVDTD FLNLHTTAAN SAVSHPSGQW LSRAILHRDH  120
SDVLDEVADA ADAMIGATTL SRESDDLKNN SSGGGGEGVN NSDDVAVESD GNEGAYGGDA  180
AMNWQNARFK AEILAHPLYE QLLSAHVACL RIATPVDQLP RVDSQLARSQ NVAAKYSSFG  240
HRSQPIAGNG KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM EAVYACWEIE QSLQSLTGVS  300
PGEGTGATMS DDDEDQTDSD ANLFDGSFEG HDAMGFGPLI PTDSERSLME RVRHELKHEL  360
KNQGYKEKIL DIREEILRKR RAGKLPGDTT SVLKAWWQSH SNWPYPTEED KAKLVQETGL  420
QLKQINNWFI NQRKRNWHTN PSTSTTLKTK RKRSNAGEAT GNNHP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	433	453	RKRNWHTNPSTSTTLKTKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	1e-160	TALE family protein