PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961820.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family BBR-BPC
Protein Properties Length: 322aa    MW: 36008.9 Da    PI: 10.3041
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961820.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind389.83.9e-11913221301
       GAGA_bind   1 mdddgsre..rnkg.yyepa..aslkenl..glqlmssiaerdakirernlalsekkaavaerdmaflqrdkalaernkalverdnkllalllve 88 
                     mdd g+re  r+k+ +y++a  + + +++   +q+m+++aerda+i+ernlalsekkaa+aerdmaflqrd+a+aern+al+erdn++++l++++
  XP_022961820.1   1 MDDGGHREngRHKTdHYKSAqgQWMMQHQpsMKQIMTIMAERDAAIQERNLALSEKKAALAERDMAFLQRDAAIAERNNALLERDNAIATLQYRD 95 
                     9*****9999***999996656445545422469************************************************************* PP

       GAGA_bind  89 nsla...salpvgvqvlsgtksidslqqlse..pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkak......kkkkkse 172
                     nsl     ++p+g+q+ +g+k+i++ qq++   p++++s ++ re++ +ea p++  a+e +++++kk++q++k+  ++++k      k+k+++e
  XP_022961820.1  96 NSLPnnsLSCPPGCQIARGVKHIHHPQQHTVhiPHMNESNYNSREMHPNEASPVSPVASELTKTRRKKRTQEGKTVTTPNKKvskaprKVKREGE 190
                     *98777789******************944347********************999888888887777666655433333221111123333333 PP

       GAGA_bind 173 kskkkvkkesader.............skaekksidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaR 254
                     + +          +             +++++k +dl+ln+v++Dest+P+P+CsCtG+ rqCYkWGnGGWqSaCCtttiS+yPLP+++++r+aR
  XP_022961820.1 191 DLN----------KvmvgkargigndhKQSDWKGQDLGLNQVAFDESTMPAPICSCTGVIRQCYKWGNGGWQSACCTTTISMYPLPAVPNKRHAR 275
                     322..........12233344566666999***************************************************************** PP

       GAGA_bind 255 iagrKmSqgafkklLekLaaeGydlsnpvDLkdhWAkHGtnkfvtir 301
                     ++grKmS++af+klL++LaaeG+dls pvDLk+ WAkHGtn+++ti+
  XP_022961820.1 276 LGGRKMSGSAFNKLLNRLAAEGHDLSAPVDLKNNWAKHGTNRYITIK 322
                     **********************************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MDDGGHRENG RHKTDHYKSA QGQWMMQHQP SMKQIMTIMA ERDAAIQERN LALSEKKAAL  60
AERDMAFLQR DAAIAERNNA LLERDNAIAT LQYRDNSLPN NSLSCPPGCQ IARGVKHIHH  120
PQQHTVHIPH MNESNYNSRE MHPNEASPVS PVASELTKTR RKKRTQEGKT VTTPNKKVSK  180
APRKVKREGE DLNKVMVGKA RGIGNDHKQS DWKGQDLGLN QVAFDESTMP APICSCTGVI  240
RQCYKWGNGG WQSACCTTTI SMYPLPAVPN KRHARLGGRK MSGSAFNKLL NRLAAEGHDL  300
SAPVDLKNNW AKHGTNRYIT IK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1160186RRKKRTQEGKTVTTPNKKVSKAPRKVK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42520.11e-144BBR-BPC family protein