PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961710.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

HSF

Protein Properties

Length: 368aa MW: 41839.9 Da PI: 4.6585

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961710.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	109.9	1.8e-34	45	137	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 Fl+k++e++ed+ +++++sws+ nsf+v+d ++f++++Lp+yFkhsnf+SFvRQLn+YgF+kv+ ++ weF+++ F g+++ll++ XP_022961710.1 45 FLTKTFEMVEDPLTDSIVSWSKARNSFIVWDYHKFSSSLLPRYFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLGGQRHLLRT 130 9**************************************************************999.........************** PP XXXXXXX CS HSF_DNA-bind 97 ikrkkse 103 ikr++++ XP_022961710.1 131 IKRRRHS 137 *9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MDEMEVKPEE SVAVGTAVCS SSSSSGSSVT PQPIEGIHDV GPPPFLTKTF EMVEDPLTDS 60 IVSWSKARNS FIVWDYHKFS SSLLPRYFKH SNFSSFVRQL NTYGFRKVDP DRWEFANEGF 120 LGGQRHLLRT IKRRRHSTQS FQHHQGGICV ELGEFGLEGE LERLKRDRSS LMAELVRLRQ 180 QHQSSREQII AMEDRLEKSE NKQKQIMTFL SKALKNPSFV QKFIHSNQGR ELRGVEIGRK 240 RRLTSSPSVE NLQEESVPVA VKQEEPDMET LLAVNFEGES NGEITDPVSD GMPMAAMDVG 300 LSAHEELGFF SELWAEDPWA GYPEEEPIMV GNQSDIDVEV EDLIAEPPDW PENLQDLVDQ 360 MEFLRPKP

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MDEMEVKPEE SVAVGTAVCS SSSSSGSSVT PQPIEGIHDV GPPPFLTKTF EMVEDPLTDS  60
IVSWSKARNS FIVWDYHKFS SSLLPRYFKH SNFSSFVRQL NTYGFRKVDP DRWEFANEGF  120
LGGQRHLLRT IKRRRHSTQS FQHHQGGICV ELGEFGLEGE LERLKRDRSS LMAELVRLRQ  180
QHQSSREQII AMEDRLEKSE NKQKQIMTFL SKALKNPSFV QKFIHSNQGR ELRGVEIGRK  240
RRLTSSPSVE NLQEESVPVA VKQEEPDMET LLAVNFEGES NGEITDPVSD GMPMAAMDVG  300
LSAHEELGFF SELWAEDPWA GYPEEEPIMV GNQSDIDVEV EDLIAEPPDW PENLQDLVDQ  360
MEFLRPKP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26150.1	1e-111	HSF family protein