PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022961660.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

E2F/DP

Protein Properties

Length: 416aa MW: 47300.2 Da PI: 8.3629

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022961660.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	81.2	9e-26	159	224	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+ lt+kf++l++++e+g+++ln+ a+ L +v ++RRiYDi+NVLe+++liek+ n+irwkg XP_022961660.1 159 RYDSSLGFLTKKFIRLVQEAEDGTLDLNKTADVL---KV--QKRRIYDITNVLEGIGLIEKTTTNHIRWKG 224 6899****************************...88..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 416 aa Download sequence
MSNAVEDLIL RHRHRHSDFR FHLLQSRSHH RDMSSSSASS SSSSAPALPP LCLLQCHRPF 60 PPSDQSNACN CRHAPGAHST VATLDLKRTY GINDSEALAC GRVVASEQRM RSNDSLCKPV 120 SSANKKQNKK LKLQKNSKSR TQKSVDEPID DPNLSTNGRY DSSLGFLTKK FIRLVQEAED 180 GTLDLNKTAD VLKVQKRRIY DITNVLEGIG LIEKTTTNHI RWKGCERRGP QELNDQVGKL 240 KAEVKSLYAD EHRLDELIRM KQELLRNLEE NANHRKNLFI TEEDILRVPS FKNQTLIAVQ 300 APQASCIEVP DPDEEACFSE RQCRLIIKST TGPIDLYLLR TAKQGLEENS SKQAKLSSSV 360 QQRNPNIHTN NICSPFHEFH GMQRILPLYN NIDDDYWFQS NSQVSITHLW GEEHNF

Sequence ? help Back to Top

Protein Sequence Length: 416 aa Download sequence

MSNAVEDLIL RHRHRHSDFR FHLLQSRSHH RDMSSSSASS SSSSAPALPP LCLLQCHRPF  60
PPSDQSNACN CRHAPGAHST VATLDLKRTY GINDSEALAC GRVVASEQRM RSNDSLCKPV  120
SSANKKQNKK LKLQKNSKSR TQKSVDEPID DPNLSTNGRY DSSLGFLTKK FIRLVQEAED  180
GTLDLNKTAD VLKVQKRRIY DITNVLEGIG LIEKTTTNHI RWKGCERRGP QELNDQVGKL  240
KAEVKSLYAD EHRLDELIRM KQELLRNLEE NANHRKNLFI TEEDILRVPS FKNQTLIAVQ  300
APQASCIEVP DPDEEACFSE RQCRLIIKST TGPIDLYLLR TAKQGLEENS SKQAKLSSSV  360
QQRNPNIHTN NICSPFHEFH GMQRILPLYN NIDDDYWFQS NSQVSITHLW GEEHNF

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	192	198	LKVQKRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G47870.1	9e-87	E2F/DP family protein