PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022961429.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family GRAS
Protein Properties Length: 306aa    MW: 34631.2 Da    PI: 4.7161
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022961429.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS213.6e-0719524276122
            GRAS  76 eelaalklfsevsPilkfshltaNqaIleavege.ervHiiDfdisqG 122
                     e+ aa++ ++ vs ++k++++++  aIlea++++ +++H +Df+i +G
  XP_022961429.1 195 EHSAATQSLYYVSGCFKLAFMATSLAILEAIKEDdRKLHGVDFNIRKG 242
                     67889999************************997888*******998 PP
2GRAS29.68.6e-10247305155214
            GRAS 155 keeleetgerLakfAeelgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrll 214
                      e+l+++ge  +++A+e +v f+fn+ v  +l+++  e+L ++ +E+l+Vn++++l+++l
  XP_022961429.1 247 DERLKKVGESQSQLAKEYDVGFKFNM-VKMELAEMMCESLGCDGDESLVVNFAFKLYQML 305
                     6899*********************9.6889999***********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 306 aa     Download sequence    
MIEQKEDSTD CLFEIEAFRM FQLFKRNVDK ETGTNILGLR IDRGREFTST EFIELCSNHG  60
IHRQFTKTCR PQQNEVAERE NHSDEEVYVA QPSAYVIKGD LEDRKNNDDN NGSDAASVIT  120
SSTSAWCETM YKLISLTAPP NQKPLFHLLL LRYVILCGFS VFQFLKIVCN RGCDDHFYGE  180
IGGCGEILAP IFGNEHSAAT QSLYYVSGCF KLAFMATSLA ILEAIKEDDR KLHGVDFNIR  240
KGDNGGDERL KKVGESQSQL AKEYDVGFKF NMVKMELAEM MCESLGCDGD ESLVVNFAFK  300
LYQMLD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G52510.14e-22GRAS family protein