PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022961217.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | GRF | ||||||||
Protein Properties | Length: 329aa MW: 37289.7 Da PI: 9.4434 | ||||||||
Description | GRF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRC | 77.8 | 1.1e-24 | 76 | 119 | 1 | 44 |
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk+++ XP_022961217.1 76 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVD 119 79***************************************986 PP | |||||||
2 | QLQ | 57.6 | 3.8e-20 | 8 | 43 | 2 | 37 |
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiqk 37 +FT aQ+q+L++Q+l++Ky+++++P+Pp+Ll+ i++ XP_022961217.1 8 PFTSAQWQELENQALVFKYMVSGVPIPPDLLFSIKR 43 8*******************************9985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 329 aa Download sequence |
MSARSMFPFT SAQWQELENQ ALVFKYMVSG VPIPPDLLFS IKRSTLESPF TSKLFPHHSQ 60 HVGWNCLQMS LGRKIDPEPG RCRRTDGKKW RCSKEAYPDS KYCERHMHRG KNRSRKPVDV 120 LKTTATNELN HLSSQAFSSL NKNSSLHSYR PFPAPQMSSN PNGNGISTKD TNTLLLLDPG 180 SYSDRGPDYR YTYGLKEEVD EHVFFSQEPS EATARADFSA SSTVDSLQLT PLTMSCSSLY 240 PKQNNFSSLQ SGQSCYQLHQ SLTDPLKQQK REESQKKVHR FFDEWPQKGG SWLDFNDKSS 300 NIGSVSTTRL SISIPTASNE LPIFRSKNP |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13960.1 | 3e-56 | GRF family protein |