PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022961152.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | NF-YA | ||||||||
Protein Properties | Length: 256aa MW: 27898.7 Da PI: 7.0779 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 98.6 | 6.4e-31 | 174 | 230 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 ++p++VNaKQyq+Il+RRq+Rak+e+ekkl +k+rkpylheSRh+hA+rR R+sgGrF XP_022961152.1 174 QDPVFVNAKQYQGILRRRQARAKAEAEKKL-IKARKPYLHESRHQHAIRRSRSSGGRF 230 58****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence |
MQSKSETNNQ LQSDPNGAPS TTIYYEPWCS SMGYSPFPLP VVGGNASSST SLEFPNGGSE 60 SNDGQSVSNN DVNDEEDDVS KEVQATGSPH SAGSYRQDAQ KMQHVSSNLP AMHGESLTQS 120 TQLELVGHSI ACASNPYQDP YYGGMMAFYG HQPVGYPMVG APHARMPLPI EIAQDPVFVN 180 AKQYQGILRR RQARAKAEAE KKLIKARKPY LHESRHQHAI RRSRSSGGRF AKKNEADGKE 240 SSEQQHGSSL TIKASE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12840.2 | 2e-49 | NF-YA family protein |