PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960686.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB_related
Protein Properties Length: 327aa    MW: 35229.1 Da    PI: 9.7437
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960686.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding38.42.8e-12125169347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE+ +++ + ++lG g+W+ I+r   +++t+ q+ s+ qky
   XP_022960686.1 125 PWTEEEHRIFLIGLEKLGRGDWRGISRNYVTTKTPTQVASHAQKY 169
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MGRKCSHCGN IGHNSRTCTN FRPSITPNFN VGSGLIRLFG VHLDSSSSSS SSSSSSSSTT  60
SSSSAAAFAI KKSFSTDCLS SSSSSSSFST SRIQIDHNLE PSKPTNGYLS DGLLNGDQER  120
KKGVPWTEEE HRIFLIGLEK LGRGDWRGIS RNYVTTKTPT QVASHAQKYF LRQSTVNKKN  180
RRSSLFDMVG TAYDTTTTAL SQCLKISSNS QTHSNKNEMN IKKELNLPLL ESKITTTFAS  240
SQQLGSSMEV MNNNNQASSS SSSIWLYGLI DSQLKSASQT MICSSSSGAG GPDLELTLAA  300
PRASNLEYEQ TKKASTGSLL VDPIRVP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G56840.17e-54MYB_related family protein