PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960501.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 311aa    MW: 34685.9 Da    PI: 7.4368
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960501.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.5e-32150205258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ ++srkpylheSRh hA+rR+RgsgGrF
  XP_022960501.1 150 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IRSRKPYLHESRHLHAMRRARGSGGRF 205
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 311 aa     Download sequence    
MPSKPGIVEQ EVADGAKYLL QSTKYSEPWW HGVGNNTITD EDATKTSSAE YLNVTVTSAA  60
MLSQANDENT GKEVQHLKYI PFSTSPSVGE RLDPNSQMEL VGHSIVLTSY PFSDAQCCQM  120
LTSYGPQTTL PHFYGLHHAR MPLPLEMEAE PVYVNAKQYH GILRRRQSRA KAELEKKVIR  180
SRKPYLHESR HLHAMRRARG SGGRFLNTKK PNSVISNKTM EEDINSGINH VSEPVSEGGS  240
NYMVANENGM KDTLDDQQKE DKEFMPQNMQ ITHAFFNGGK SNGLGLSTYN SKLADESMQV  300
NAAPQRAIPI K
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.17e-42NF-YA family protein