PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960498.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 324aa    MW: 36327.9 Da    PI: 7.8119
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960498.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.63.8e-32163218258
       CBFB_NFYA   2 eplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     ep+YVNaKQy++Il+RRq+Rak+e ekk+ ++srkpylheSRh hA+rR+RgsgGrF
  XP_022960498.1 163 EPVYVNAKQYHGILRRRQSRAKAELEKKV-IRSRKPYLHESRHLHAMRRARGSGGRF 218
                     8****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 324 aa     Download sequence    
MFFLLGWQNK FQTMPSKPGI VEQEVADGAK YLLQSTKYSE PWWHGVGNNT ITDEDATKTS  60
SAEYLNVTVT SAAMLSQAND ENTGKEVQHL KYIPFSTSPS VGERLDPNSQ MELVGHSIVL  120
TSYPFSDAQC CQMLTSYGPQ TTLPHFYGLH HARMPLPLEM EAEPVYVNAK QYHGILRRRQ  180
SRAKAELEKK VIRSRKPYLH ESRHLHAMRR ARGSGGRFLN TKKPNSVISN KTMEEDINSG  240
INHVSEPVSE GGSNYMVANE NGMKDTLDDQ QKEDKEFMPQ NMQITHAFFN GGKSNGLGLS  300
TYNSKLADES MQVNAAPQRA IPIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.11e-41NF-YA family protein