PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960424.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 315aa    MW: 35041.2 Da    PI: 8.2874
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960424.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.52.9e-14250295655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er+RR ri +++ +L+el P      +k  sKae+Le+AveYIk Lq
  XP_022960424.1 250 SIAERNRRTRISERMKKLQELFPDM----DKQTSKAEMLELAVEYIKGLQ 295
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 315 aa     Download sequence    
MEDWVLLIIW VSSDFRFLGF GISSNSLEAY PDFMDCDSTN IHSAGGLMRY WSAPTSVFAN  60
LLDGTEGLLP SNNGGGGGSG AEDYRVIRST SPVVVNRSCS MVNCGGGDQI GNSLGVMNLN  120
NSMQLDLGAR NSGNLFRQSS SPAGIFSNFT AENGNTTRQY DDNFLNSSWH NSAIKDLKRG  180
RDNNGRTFST SIVLETQNAG YENNNRGLAH HLSFPITFNN DPVEKFFRFQ EHPIRHQIRA  240
KRGCATHPRS IAERNRRTRI SERMKKLQEL FPDMDKQTSK AEMLELAVEY IKGLQRQVKT  300
LTDTNAKCAC LCSSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42280.13e-44bHLH family protein