PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022960344.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | FAR1 | ||||||||
Protein Properties | Length: 209aa MW: 23915.2 Da PI: 7.822 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 80.6 | 2.7e-25 | 43 | 132 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 kfY eYA+++GF vr+ + + s +g++ r++ C+k+g++ +++ + +++r+++r gCka++ vk+ek+gkw v++++++HnH+l+ XP_022960344.1 43 KFYVEYARQMGFVVRIMQRRCSGIDGRTLARRLGCNKQGFSPNRRGIYGSDKKPRPSSREGCKATILVKMEKSGKWIVSRIVKDHNHPLV 132 6******************************************99999****************************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence |
MNLDDETGRA HDSIEINGDA AEGNLILEPY VGMEFDSEDA ARKFYVEYAR QMGFVVRIMQ 60 RRCSGIDGRT LARRLGCNKQ GFSPNRRGIY GSDKKPRPSS REGCKATILV KMEKSGKWIV 120 SRIVKDHNHP LVVCSNGFSC SGDKDKKIEE LKMELEHQEQ QCVAYREKLF DFISTVEEQT 180 EELSSKIQMI IGNVRQVESG MQKHYPFRQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G12850.1 | 9e-67 | FAR1 family protein |