PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022960203.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 342aa    MW: 39110.2 Da    PI: 6.162
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022960203.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B398.34.9e-3185188198
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    +  + ++  l +ed++g+ W+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022960203.1  85 FDKVVTPSDVGKLNRLVIPKQHAEKYfplnSTTNDKGLILNFEDRNGKPWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDVVSFQRGvGDfAK 179
                     89*************************998434447789************************************************65577777 PP

                     E..EEEEE- CS
              B3  90 felvvkvfr 98 
                      +l++ ++ 
  XP_022960203.1 180 DRLFIDWRH 188
                     778887776 PP
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    
MDFLTKSKQE EEEEEEEEEE EEEEEEEEEI PTVACDFFTN SHSQNHHHCL QHPPNHSQNQ  60
HPPMDLSLRI DSNNNGFAVE REHMFDKVVT PSDVGKLNRL VIPKQHAEKY FPLNSTTNDK  120
GLILNFEDRN GKPWRFRYSY WNSSQSYVMT KGWSRFVKDK KLDAGDVVSF QRGVGDFAKD  180
RLFIDWRHRS DTSRPHPLLL LPQSLRWASD RHFTTLPPPP PLQPRRTHHH LYPNYALQMS  240
NLGMGSHGSN NNSSMYYFQP SISSSTSSSL YRMRNGDGIV VNNEGSSMGI NKGGSGGTTL  300
KRLRLFGVNM ECAAADGEGE HDVPNGGVSR RGKEPLPLNW DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01030.18e-63B3 family protein