PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022959904.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 280aa MW: 31261.2 Da PI: 8.0031 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 18.5 | 5.5e-06 | 119 | 138 | 1 | 20 |
EEETTTTEEESSHHHHHHHH CS zf-C2H2 1 ykCpdCgksFsrksnLkrHi 20 ++C+ C+k F+r nL+ H+ XP_022959904.1 119 FSCHLCSKAFNRYNNLQMHM 138 89*****************9 PP | |||||||
2 | zf-C2H2 | 14 | 0.00015 | 203 | 225 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F k + ++H +++ XP_022959904.1 203 FSCRKCSKAFAVKGDWRTHEKNC 225 89*****************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 280 aa Download sequence |
MTDPNYSTFF SPNSFTFIPL PPSPPPLSPP QALPLINTLS LETTDQPSSS TTNNHENALT 60 LDFCLSCPTS DLDLSTSFPP DPTGKTHHDD LSPLPSPISG KGQFWIPTPS QILFGPSQFS 120 CHLCSKAFNR YNNLQMHMWG HGSQYRKGPE SLKGTQPTAM LRLPCYCCAP GCKHNIDNPT 180 SRPLKDFRTL QTHYKRKHGI KPFSCRKCSK AFAVKGDWRT HEKNCGKIWY CFCGSDFKHK 240 RSLKDHIKAF GQGHGSLGLD YFDDDNEPAS EVEQDGTVVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G57670.1 | 1e-113 | C2H2 family protein |