PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022959279.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | ERF | ||||||||
Protein Properties | Length: 190aa MW: 21273.7 Da PI: 8.2875 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 30 | 81 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56 ++++GVr + +g+Wv+eIr+p++ + r++lg++ tae+Aa+a++ a+++++g+ XP_022959279.1 30 PKFRGVRLRA-WGKWVSEIREPRK---KSRIWLGTYPTAEMAARAHDVAALAIKGH 81 79*****998.**********843...6***********************99986 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence |
MTTTSHHSAT VSSAVTCRKR RRTLTEESTP KFRGVRLRAW GKWVSEIREP RKKSRIWLGT 60 YPTAEMAARA HDVAALAIKG HRAFLNFPQI KHQLPRPASL SAKDIQAAAA QAAALKHQPN 120 PTESSPSETT SCEEEDTWFD LPDLVVRGIN DGFLLDFDYS SSSSSSSWHF SGDHDDLQWH 180 SDYAHTIFPA |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 18 | 22 | RKRRR |
2 | 18 | 23 | RKRRRT |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G44940.1 | 5e-41 | ERF family protein |