PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022959075.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 914aa MW: 103359 Da PI: 7.6461

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022959075.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	166	6.3e-52	35	150	4	118
CG-1 4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrr 97 e ++rwl+++ei+aiL n++ + ++ ++ + pksg+++L++rk++r+frkDG++wkkkkdgktv+E+he+LKvg+ve +++yYah+ +nptf rr XP_022959075.1 35 EaSARWLRPNEIHAILCNYKYFVIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNVERIHVYYAHGLDNPTFVRR 129 4589***************************************************************************************** PP CG-1 98 cywlLeeelekivlvhylevk 118 cywlL+++le+ivlvhy+e+k XP_022959075.1 130 CYWLLDKSLEHIVLVHYRETK 150 ****************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 914 aa Download sequence
MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV 60 KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG 120 LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP SAHWLLSEEL 180 DSRATNVYSV GGNELSEPSD TTTVMVHEQR LHEINTLEWD ELLVTNEPLK PAMPKEDKLS 240 CFDQQNQVPI SVANKIFGVI TSFNNPVEST GSANSIGSVN MSLMGGQTNL NVESRESIPI 300 NLLDNLLNNG LQSQDSLGQW INEVITDSPG SVIDPAIEPS ISSVHNSYCD STLYHHQSSV 360 EQIFNITEVS PAWAFSTEKT KIVIIGYFSD EYVHLAKSNI SVVCGDTSIN ADFVQPGVYR 420 CLVEPHSPGL VHLYLSLDGH KPISQVLNFE YRAPLLQVPE VTSEQILKWE EFQVQMRLAH 480 LMFSTSKSLS IMSTKLSPTA LNDAKKLAVK TSGISDGWIY LLKSVTENKT PIPQAREGVL 540 EMILRSRLRD WLIERVAEGS KKSTEFDVNG QGVIHLCAIL GYTWAVHLFV WSGLSINFRD 600 KSGWTALHWA AYYGRERMVA ALLSVGAKPS LITDPTSKNP LGYTAADLAS MNGFNGLAAY 660 LSEKALVSHF EDMSLAGNVS GSLETSTIPD TTNFDSVSEE QMYMKETLAA YRTAADAAAR 720 IQAAFREHSL KQRTDAIELS TPEAEARGII AAMKIQHAFR NFETRKKMAA AAHIQYRFRT 780 WKIRKDFLNM RRQTIRIQAA FRGFQVRRQY RKIVWSVGIV EKAILRWRLK RKGFRGLQVA 840 PAEVTEDQET GMEEDFYRVS QKQAEERVER AVIRVQAMFR SKKVQEEYRR MKLTHAEAAL 900 EYEELSHPDM KMNG

Sequence ? help Back to Top

Protein Sequence Length: 914 aa Download sequence

MSLSMKDDVQ GSLVGSEIHG FHTLQDLDVK NIREEASARW LRPNEIHAIL CNYKYFVIHV  60
KPVNLPKSGT IVLFDRKMLR NFRKDGHNWK KKKDGKTVKE AHEHLKVGNV ERIHVYYAHG  120
LDNPTFVRRC YWLLDKSLEH IVLVHYRETK EWQSSPSTSM NSNSGSVSNP SAHWLLSEEL  180
DSRATNVYSV GGNELSEPSD TTTVMVHEQR LHEINTLEWD ELLVTNEPLK PAMPKEDKLS  240
CFDQQNQVPI SVANKIFGVI TSFNNPVEST GSANSIGSVN MSLMGGQTNL NVESRESIPI  300
NLLDNLLNNG LQSQDSLGQW INEVITDSPG SVIDPAIEPS ISSVHNSYCD STLYHHQSSV  360
EQIFNITEVS PAWAFSTEKT KIVIIGYFSD EYVHLAKSNI SVVCGDTSIN ADFVQPGVYR  420
CLVEPHSPGL VHLYLSLDGH KPISQVLNFE YRAPLLQVPE VTSEQILKWE EFQVQMRLAH  480
LMFSTSKSLS IMSTKLSPTA LNDAKKLAVK TSGISDGWIY LLKSVTENKT PIPQAREGVL  540
EMILRSRLRD WLIERVAEGS KKSTEFDVNG QGVIHLCAIL GYTWAVHLFV WSGLSINFRD  600
KSGWTALHWA AYYGRERMVA ALLSVGAKPS LITDPTSKNP LGYTAADLAS MNGFNGLAAY  660
LSEKALVSHF EDMSLAGNVS GSLETSTIPD TTNFDSVSEE QMYMKETLAA YRTAADAAAR  720
IQAAFREHSL KQRTDAIELS TPEAEARGII AAMKIQHAFR NFETRKKMAA AAHIQYRFRT  780
WKIRKDFLNM RRQTIRIQAA FRGFQVRRQY RKIVWSVGIV EKAILRWRLK RKGFRGLQVA  840
PAEVTEDQET GMEEDFYRVS QKQAEERVER AVIRVQAMFR SKKVQEEYRR MKLTHAEAAL  900
EYEELSHPDM KMNG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G16150.1	0.0	CAMTA family protein