PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958506.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 340aa    MW: 36971.4 Da    PI: 7.6979
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958506.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.15.2e-32168224158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep++VNaKQyq+Il+RRq+Rak+e e+kl +k rkpylheSRh+hA+rR+Rg+gGrF
  XP_022958506.1 168 QEPVFVNAKQYQGILRRRQARAKAEVENKL-IKVRKPYLHESRHQHAMRRARGTGGRF 224
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MQSKSKSVNQ VESEPPNMQQ TGSYSEPWWR SIGYNPISPS ATGGNVSNSP SLECTNGASE  60
SNDQSMSNAD LNEDDDDDTT KETQAASYGQ GQHNNQHAVS TAPRVHGGCI TQPPQLELVG  120
HSIACASNQY QDPYYAGLMA AYGHQPMGYP PFIGMPHARM ALPLEVAQEP VFVNAKQYQG  180
ILRRRQARAK AEVENKLIKV RKPYLHESRH QHAMRRARGT GGRFAKKNEA KSLSSTMKSK  240
ESGSGQAISS SSSGSEAVPG ALAETWNSSN SQQEARAQLH ESYEARSYVN GNSHFHNYSS  300
FQASSYALLS GERGEDGDCS GQQRGSISEN QAAQRRLAIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G12840.26e-74NF-YA family protein