PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958436.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 297aa    MW: 32197.1 Da    PI: 4.5083
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958436.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.30.00012271294123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++sF +   L++H +  H
  XP_022958436.1 271 FSCKSCDRSFGSDGALQSHSKAkH 294
                     89*****************88777 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEFWGVEVKP GQSLVVKPGI QQYLHLSQAT LGETKKDKAN ENVTIFLKIG GQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKGGSVYC AGYQAYAEDQ DPGDYFDSDS GSEDEELELP  120
LAQNGKATQK EKAIADKSNA AKALSLKKSD AKPLKPSKDE DDSEDDDESD EDEDFDDESD  180
EEMLNADSSD SDDEDDDTES DEETPKKVEP TKKRPNESAS KTTPLPAKKA KLASPEKTDS  240
KKGGHTATPH PTKKNAKTPA KSETPKSGGQ FSCKSCDRSF GSDGALQSHS KAKHGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.13e-30C2H2 family protein