PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958434.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 298aa    MW: 32488.3 Da    PI: 4.6214
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958434.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H214.20.00013271294123
                     EEETTTTEEESSHHHHHHHHHH.T CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirt.H 23 
                     ++C+ C++sF +   L++H +  H
  XP_022958434.1 271 FSCKSCDRSFGSDGALQSHGKAkH 294
                     89*****************88766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    
MEFWGVEVKP GQALSVKPGD QKYLHLSQAT LGELKKDKSK ESVTIFLKID EQKLVLGILS  60
AEKFPQLSFD LVFEKEFELS HNGKSGSIYC MGYQASAEDQ EHEEYSDSDF GSEDEELALQ  120
HVPNGKPSQK EEKSIVGKHS SLKPETSKKT HSKSLEPSKE DEDDDSEDDD ESDDEDSSDE  180
SDEEMLGSDS DSDDEDDDIE SEEETPKRKV ESNKKRSNDS ASVTPVSKKS KLASAEKSDA  240
KKGGHTATPH PAKKPVKTPA KAATPKSGGQ FSCKSCDRSF GSDGALQSHG KAKHGGGK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03740.11e-27C2H2 family protein