PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958357.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family B3
Protein Properties Length: 346aa    MW: 38453.5 Da    PI: 7
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958357.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B3102.13.1e-3253157199
                     EEEE-..-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-.SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld.gr.se 89 
                     f+kv tpsdv+k++rlv+pk++ae++    ++ +e++  l +ed++g+sW+++++y+++s++yv+tkGW++Fvk+++L++gD+v F++  g+  +
  XP_022958357.1  53 FDKVVTPSDVGKLNRLVIPKQHAERFfpldSSTNEKGLLLNFEDRHGKSWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDVVSFQRGvGEiGR 147
                     89***************************966778999*************************************************66699999 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                      +l++ ++r+
  XP_022958357.1 148 DRLYIDWRRR 157
                     9999999997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    
MDFGFNSLQN HHLRSRNGLN LEPAEEASSA AVDFDGGGGG GGGGGEVERE HMFDKVVTPS  60
DVGKLNRLVI PKQHAERFFP LDSSTNEKGL LLNFEDRHGK SWRFRYSYWN SSQSYVMTKG  120
WSRFVKEKRL DAGDVVSFQR GVGEIGRDRL YIDWRRRPEL PIDHHHHHHH HPIGIRPSIV  180
MPTTAWGSLV WQPLGVTATR YHHPATVAPQ DHTHMSRINN NNSSNVNSMY DRNRGYCPYG  240
YGSVESSSSS EMVFFGRASR LGDGLEGKNE MQPEYMSSGG GGGGGGSMAV QESYSEEDTP  300
VKRSRLRLFG VNMEMECPIM SSSSDECDLL LSSSSNSNPK TTAPSN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46870.19e-69B3 family protein