PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958343.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 282aa    MW: 31707.5 Da    PI: 8.337
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958343.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.10.0013169190223
                     EETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   2 kCpdCgksFsrksnLkrHirtH 23 
                     kC++C+k+F++   L +H + +
  XP_022958343.1 169 KCQKCTKHFRSYRALFSHEKIC 190
                     7*****************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 282 aa     Download sequence    
MDSHKCKLCS RLFTNGRALG GHMKAHLTAA SKPPTIHVAL PSSTSSSSAA AAAADDDSLE  60
SEHNPTLYEA RENPNTNFRF SDPVFDIVLQ DRESETESKN PTCNRSKRRR QPPLEPPEPA  120
SSVSYTSPEE DLAMCLMMLS RDQRIQNQNQ SPNQFEKNRA KKPLRRKKKC QKCTKHFRSY  180
RALFSHEKIC QLKTELEEEE EEEHEHFKNG GNRRRIFKCP FCFKLFGSGQ ALGGHKRSHF  240
VSSTNGGVSV NSSVSLKVEI SLIDLNLPAP LEEDDYSVVS NA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1157168KNRAKKPLRRKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60580.12e-30C2H2 family protein