PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022958273.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family AP2
Protein Properties Length: 456aa    MW: 50076.1 Da    PI: 6.9658
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022958273.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2292.7e-09132187155
             AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                     s y+GV++++++gr++A+++d  +     + r     ++ +++Aa+a++  ++k++g
  XP_022958273.1 132 SIYRGVTRHRWTGRYEAHLWDnSCR-ReGQSRKGRQGYDKEDKAARAYDLVALKYWG 187
                     57*****************994333.2323444445699999*************98 PP
2AP247.44.6e-15232281355
             AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GV+++++ grW A+I  +     +k  +lg+f t+eeAa+a++ a+ k++g
  XP_022958273.1 232 YRGVTRHHQHGRWQARIGRVAG---NKDLYLGTFSTEEEAAEAYDIAAIKFRG 281
                     9***************988532...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 456 aa     Download sequence    
MGSMNSNNCL SFPLSPTNPS FSLPEIPFQA PNEWNLISTE GGGEAPKVAD FLGVSKAENE  60
THLMGFNEIH TDYLFPITPF NVDSTTTNSN SLQCLNLSMG SGKGEPTPPP LNNTALHVTP  120
TRTSDTLGHR TSIYRGVTRH RWTGRYEAHL WDNSCRREGQ SRKGRQGYDK EDKAARAYDL  180
VALKYWGTST TTNFPISNYE KEVEEMKHMT RQEFVAAIRR KSSGFSRGAS MYRGVTRHHQ  240
HGRWQARIGR VAGNKDLYLG TFSTEEEAAE AYDIAAIKFR GLNAVTNFDM SRYDVKSILD  300
SNSVPIGGGA AKRLKEAQAM EASRKREEMM IALGASSSSS NSSNHRLLQS PNFTQPLLSL  360
QNHHEISPYT HDPASFHHST YSHHDSHYAN NTHPFYGGGG GGDSSGGYLV SAVGMGCTLG  420
DEYALVKVDY DMPNSDGGGY GSWSEDSVQG SNNGGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G51190.11e-157AP2 family protein