PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022957863.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 297aa MW: 32577.4 Da PI: 6.5105 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 44.3 | 4.1e-14 | 26 | 73 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l + G g+W+ +ar g+ R++k+c++rw +yl XP_022957863.1 26 KGLWSPEEDDKLRTYMLNNGQGCWSDVARNAGLQRCGKSCRLRWINYL 73 678*******************************************97 PP | |||||||
2 | Myb_DNA-binding | 49.4 | 1e-15 | 79 | 122 | 1 | 46 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg+++++E++l ++++ +lG++ W+ Ia++++ gRt++++k++w++ XP_022957863.1 79 RGAFSPQEEDLVIHLHSLLGNR-WSQIAARLP-GRTDNEIKNFWNS 122 89********************.*********.***********97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 297 aa Download sequence |
MRKPDAAAPG GGCGGGGPPA ATKLRKGLWS PEEDDKLRTY MLNNGQGCWS DVARNAGLQR 60 CGKSCRLRWI NYLRPDLKRG AFSPQEEDLV IHLHSLLGNR WSQIAARLPG RTDNEIKNFW 120 NSTIKKRLKN LSSTPSPNTS SDSHSGDSKS NLFATFVLGQ DQQQQQNSID FPIFAADPSP 180 SVIALDSFPL LSTTHGVPFF PTGGVEMGFY REDDSFFNLP LLQSVNTTTT TATATAATGG 240 ETKHSNYLIN NNPKMESMNG GVGANFIHEE FSMGEWELED LMKDVPSSFP CLNFQVQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G12870.1 | 1e-67 | MYB family protein |