PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957448.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family ERF
Protein Properties Length: 308aa    MW: 34573.9 Da    PI: 4.863
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957448.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.6e-18110157152
             AP2   1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkk 52 
                     s+y+GVr++  +g+W+AeIrd + +   r r++lg+++taeeA +a++  r++
  XP_022957448.1 110 SKYRGVRQRA-WGKWAAEIRDpF-K---RSRIWLGTYDTAEEASQAYESRRLQ 157
                     89*****998.**********55.3...5******************876665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MPHSNQKLVS SNRKSKLHPK NFSADSKMRR KVRIICYDPD ATDSSSSEDE GERYGRKFNR  60
TVHEIHLPPL KKALESESSQ NSNNENKNPK LKQSKVQIKN PSSSRRQSSS KYRGVRQRAW  120
GKWAAEIRDP FKRSRIWLGT YDTAEEASQA YESRRLQFEA MAAEMAVEEG NRTASSSAAV  180
LSESTAETTV SHTSPSSVFE WDDSTSQSQD LKVVGDSIKE ETGTNMNYLQ ETDQSHPFID  240
EINMGINFDS ILADGIGMLL EDFVSLENTQ IFGFGDDEPS GFPNADFGDF GNDDISCWLD  300
ESINITCP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68550.12e-34ERF family protein