PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957439.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YC
Protein Properties Length: 281aa    MW: 31430.8 Da    PI: 5.0594
Description NF-YC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957439.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YC61.51.7e-196861898
           NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98
                    ++++P arikki++adedv +i+  +Pvl+ska elf+ +l  r++  + +   +t++   ++ +v++  +fdfl div r
  XP_022957439.1  6 DTRFPAARIKKIMQADEDVGKIALAVPVLVSKALELFLQDLCDRTYEITLQRGAKTMNSLHLKHCVQSYSVFDFLRDIVSR 86
                    5789**************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence    Length: 281 aa     Download sequence    
MRKKLDTRFP AARIKKIMQA DEDVGKIALA VPVLVSKALE LFLQDLCDRT YEITLQRGAK  60
TMNSLHLKHC VQSYSVFDFL RDIVSRVPDY GHGHSDGAVD DRKRRKPLAD ESNDIDEMKK  120
SKTHDMSHGS TGRGRGRGRG RGRGRPARSV EKDNFQPNPD VDPCTSIENT NKNPNQDVHM  180
EPHIEPSETP KEVGKDNQTI QNIDLNADVN ASKDSKTAPA AKSDVPVEPA EPTTTESEAK  240
AADEFPAWPL SDVDKMAIDP LQYAHLSTRV DEEEEDYDEE E
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1133142RGRGRGRGRG
2133143RGRGRGRGRGR
3135144RGRGRGRGRG
4135145RGRGRGRGRGR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12480.14e-71NF-YC family protein