PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022957351.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 272aa MW: 31354 Da PI: 8.3827 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.3 | 5.7e-05 | 5 | 29 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 y C+ C s++rk++L+rH+ H XP_022957351.1 5 YICSidGCEASYRRKDHLTRHLLHH 29 899999***************9987 PP | |||||||
2 | zf-C2H2 | 21.7 | 5.3e-07 | 72 | 96 | 1 | 23 |
EEET..TTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCp..dCgksFsrksnLkrHirtH 23 ++Cp Cgk+F+ s+L++H +H XP_022957351.1 72 FVCPedGCGKVFRYASQLQKHEHSH 96 89*******************9888 PP | |||||||
3 | zf-C2H2 | 20 | 1.9e-06 | 165 | 188 | 3 | 23 |
ET..TTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 Cp..dCgksFsrksnLkrHirt.H 23 C+ C+k+Fs+ snL++H+++ H XP_022957351.1 165 CTheGCSKVFSTISNLHQHMKVvH 188 88889****************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 272 aa Download sequence |
MQRPYICSID GCEASYRRKD HLTRHLLHHQ GLIIKCPIEG CSREFAYISC VNRHLKECHE 60 GGAPPEECQK QFVCPEDGCG KVFRYASQLQ KHEHSHFKLD SIEACCAEPG CMKTFTNKKC 120 LQAHMQSFHQ YINCEICGEK KLRKNMKQHL RQKHESEGPP EAIPCTHEGC SKVFSTISNL 180 HQHMKVVHLG QKPFACGFPG CGMRFGYKHV RDNHEKKGQH VYTNGDFEAA DEQFRSKPRG 240 GRKRIRPTVE MLIRKRITPP SELDFITMDE EC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G72050.1 | 1e-102 | C2H2 family protein |