PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957222.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 331aa    MW: 36715.2 Da    PI: 7.7778
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957222.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding50.83.8e-1688133147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rg W + Ed +l ++v+ +G+ +W++Ia+++  gR++k+c++rw++ 
   XP_022957222.1  88 RGHWRPAEDTKLRELVAIYGPQNWNLIAEKLE-GRSGKSCRLRWFNQ 133
                      899*****************************.***********996 PP
2Myb_DNA-binding56.18.8e-18140183146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      r ++++eE+e+l +a++ +G++ W+ Iar ++ gRt++ +k++w+ 
   XP_022957222.1 140 RRAFSEEEEERLMQAHRIYGNK-WAMIARLFP-GRTDNAVKNHWHV 183
                      678*******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MKKPLMGMLV DDDYGMKVEG SMDLDLNSAL MSISDFPFSC ESMMSRSSET DFSDGFVENH  60
NANPASCSNA NNNNTTTPTG AQSRLCARGH WRPAEDTKLR ELVAIYGPQN WNLIAEKLEG  120
RSGKSCRLRW FNQLDPRINR RAFSEEEEER LMQAHRIYGN KWAMIARLFP GRTDNAVKNH  180
WHVIMARKYR EHSRCYRRRK LTQSVYTKMD QDLSFLKHHN MPNFQASIGA VDYAFLTQMP  240
IAGAEAMPCD TPFFTSCAHL SNLNVLPDPK SRFWDGTGNG ILVPGSQSEY GACNTAAAAA  300
NDGVGGSQVA TGGSSSSPRF IDFLGVGATG S
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26780.18e-77MYB family protein