PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022957208.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YB
Protein Properties Length: 185aa    MW: 20138.5 Da    PI: 4.7723
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022957208.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB182.14.6e-5738133297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPian+srimkk+lPan+ki+kdak+tvqecvsefisfvtseasdkcq+ekrktingddllwa+atlGfe+y++plk yl++yrele +
  XP_022957208.1  38 REQDRFLPIANISRIMKKALPANGKIAKDAKDTVQECVSEFISFVTSEASDKCQKEKRKTINGDDLLWAMATLGFEEYIDPLKSYLTRYRELECD 132
                     89*******************************************************************************************98 PP

           NF-YB  97 k 97 
                      
  XP_022957208.1 133 A 133
                     6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MPDLGLHDLA DMAEPPTSPP GGSHESGGEQ SPITGGAREQ DRFLPIANIS RIMKKALPAN  60
GKIAKDAKDT VQECVSEFIS FVTSEASDKC QKEKRKTING DDLLWAMATL GFEEYIDPLK  120
SYLTRYRELE CDAKGSSRGG DESAKRDAVG AMPGQNSQQY MQSGALTYIN TQGQHLIIPS  180
MQNNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53340.15e-72NF-YB family protein