PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022957152.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 383aa MW: 41682.4 Da PI: 9.563

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022957152.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.7	3.5e-40	104	164	2	62
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62 ++k+l+cprC+s++tkfCyynny+++qPr+fCk+C+ryWt+GG++rnvPvG+grrknk+ss XP_022957152.1 104 PDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSS 164 7899******************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 383 aa Download sequence
MGEVEVRDPT IKLFGKTIAL PLNHGGFVSS ESSVPKARQK GISYEELASQ KQGNGSANQI 60 TNQATSEVSE NQSEEREISS PRASKNGEQS ETSISPDNKT SKKPDKILPC PRCNSMDTKF 120 CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KSSSSSHLCQ LIIPDGGIHH 180 HQFLGKNGTF LTFGSDTSIF NSQNCNQNGD DHSSKSSITA SNSSDRGDKI TSQQSTVKNV 240 LPFTPQLQSF TGHSLPYSSM APPPFYPPGF PVSYYPVLPY WGCTNPPSST VINHNAQNSL 300 TNPSVLGKRL KVDDPNEAAK SSIRSPLGIK HEKAAASSIK GGALFASFQQ AAKGKEVNHI 360 ESWSLLQANP AAFSRALKFH EIA

Sequence ? help Back to Top

Protein Sequence Length: 383 aa Download sequence

MGEVEVRDPT IKLFGKTIAL PLNHGGFVSS ESSVPKARQK GISYEELASQ KQGNGSANQI  60
TNQATSEVSE NQSEEREISS PRASKNGEQS ETSISPDNKT SKKPDKILPC PRCNSMDTKF  120
CYYNNYNVNQ PRHFCKNCQR YWTAGGTMRN VPVGAGRRKN KSSSSSHLCQ LIIPDGGIHH  180
HQFLGKNGTF LTFGSDTSIF NSQNCNQNGD DHSSKSSITA SNSSDRGDKI TSQQSTVKNV  240
LPFTPQLQSF TGHSLPYSSM APPPFYPPGF PVSYYPVLPY WGCTNPPSST VINHNAQNSL  300
TNPSVLGKRL KVDDPNEAAK SSIRSPLGIK HEKAAASSIK GGALFASFQQ AAKGKEVNHI  360
ESWSLLQANP AAFSRALKFH EIA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G39660.1	2e-54	Dof family protein