PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022957101.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | RAV | ||||||||
Protein Properties | Length: 342aa MW: 38318.1 Da PI: 9.3115 | ||||||||
Description | RAV family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 43.2 | 9.7e-14 | 60 | 108 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 s++kGV + +grW A+I++ ++r++lg+f +eeAa+a++ a+++++g XP_022957101.1 60 SRFKGVVPQP-NGRWGAQIYEK-----HQRVWLGTFNEEEEAARAYDVAAQRFRG 108 689***9788.8*********3.....5*************************98 PP | |||||||
2 | B3 | 94.8 | 5.7e-30 | 181 | 282 | 1 | 96 |
EEEE-..-HHHHTT-EE--HHH.HTT......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSE CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrse 89 f+k+ tpsdv+k++rlv+pk++ae++ + + ++ l +ed g++W+++++y+++s++yvltkGW++Fvk+++Lk+gD+v F + ++ XP_022957101.1 181 FEKAVTPSDVGKLNRLVIPKQHAEKNfplqtgSTASSKGLLLNFEDGGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSPGQD 275 89*************************9998733334677899999999***************************************9543366 PP E..EEEE CS B3 90 felvvkv 96 ++l++ + XP_022957101.1 276 KQLYIEW 282 6666666 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 342 aa Download sequence |
MDGICIDQTT STESQSTNFP LLKSPPPETS LCRVGSGFTS VVLDSDSCGV EAESRKLPSS 60 RFKGVVPQPN GRWGAQIYEK HQRVWLGTFN EEEEAARAYD VAAQRFRGRD AVTNFKDEDD 120 DDDVSAFLNS HSKAEIVDML RKHTYLHELH QSKRNAGLSG LDRKHNRSLS GLDSDARELL 180 FEKAVTPSDV GKLNRLVIPK QHAEKNFPLQ TGSTASSKGL LLNFEDGGGK VWRFRYSYWN 240 SSQSYVLTKG WSRFVKEKNL KAGDIVSFLK SPGQDKQLYI EWKSRKASPT TDPNMNPVHI 300 VRLFGVDIVK ASSPNTGCGE KRRELEFLAF QCTKKQRIVG AL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G13260.1 | 1e-144 | RAV family protein |