PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956795.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family MYB
Protein Properties Length: 285aa    MW: 30963.2 Da    PI: 7.2531
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956795.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.51.7e-091256446
                     S-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46
                     W+ + d+ + +a + ++ +   +W++Ia+ +  gRt +++k+++  
   XP_022956795.1 12 WSRDQDKAFENALATYPEDaadRWEKIAADIA-GRTVEEIKDHYKV 56
                     ********************************.***********86 PP
2Myb_DNA-binding42.61.4e-13118162347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +  +Rt+ q+ s+ qky
   XP_022956795.1 118 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKY 162
                      7*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 285 aa     Download sequence    
MAVDEKSKSS IWSRDQDKAF ENALATYPED AADRWEKIAA DIAGRTVEEI KDHYKVLVDD  60
VNQIESGLVP LPCYSFCSDG SPSDDTKKKG DHHGVDNSEP CMGNKAPRSD QERRKGTAWT  120
EDEHRLFLLG LDKYGKGDWR SISRNFVVTR TPTQVASHAQ KYFIRLNSMN KDRRRSSIHD  180
ITRVDNGDVS AHQGPITGEA NSSGGGGGSS TSNSSKQPSQ PPTGSFDVGI YGALAVEQPV  240
GGPFGPAVAT PVSTPPAAHT TYAVRSRVVN SLVRRPPVNM SSITY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.16e-91MYB family protein