PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022956537.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB | ||||||||
Protein Properties | Length: 290aa MW: 33120.9 Da PI: 9.0924 | ||||||||
Description | MYB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 27 | 1.1e-08 | 24 | 69 | 3 | 46 |
SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 +WT+eE +++ a + + ++ +W ++a++++ g+t +++ ++ XP_022956537.1 24 KWTKEENKRFESALAIFDKEtpdRWFKVAAMIP-GKTVDDVIKQYRE 69 8*****************99*************.*******999986 PP | |||||||
2 | Myb_DNA-binding | 42.1 | 2e-13 | 119 | 163 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT+eE+ +++++ ++G+g+W+ I+r + + +t+ q+ s+ qky XP_022956537.1 119 PWTEEEHMKFLRGLLKYGKGDWRNISRNFVNSKTPTQVASHAQKY 163 8*****************************9*************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 290 aa Download sequence |
MKTLYPSSHL SSSAWFLLHN PTTKWTKEEN KRFESALAIF DKETPDRWFK VAAMIPGKTV 60 DDVIKQYREL EEDVYEIEAG RFPIPGYDLA SSFSFQFVDG RRKSSVGRGS DHERKKGVPW 120 TEEEHMKFLR GLLKYGKGDW RNISRNFVNS KTPTQVASHA QKYFMRQLSG GKDKRRPSIH 180 DITTLNLTDA TASENQNLSS SMDQLSNLPS LQRSPCYQNL LFDWNQSTDT ELLGLGPNYG 240 DPLVSFSSGI AANGIKNEQD RELSSAYYGT YSNPHKSIFQ FESSRRQVYG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G11280.1 | 1e-90 | MYB family protein |