PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956422.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C2H2
Protein Properties Length: 396aa    MW: 44283.9 Da    PI: 8.3064
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956422.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H212.20.00054283305123
                     EEETTTTEEESSHHHHHHHHHHT CS
         zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                     ++C +Cg  F++   L  H+r+H
  XP_022956422.1 283 HECAICGAEFTSGQALGGHMRRH 305
                     78********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 396 aa     Download sequence    
MALSPSFCPL SRAISLPFCP FSCISIYISH VLSLGKSKSF VLYCSIEIQS FNKKRNFGVG  60
EGRMEVDHQQ AIMGSKEQAL IAKGKRTKRQ RLHSPIPFAV PANSSSGEGG FVVDDSNFVA  120
ENNDYEVLIQ NQNNFSTSSS SGGELQPYNI VTEEEEDMAN CLILLAQGRP FCSPPKHVDA  180
RPVHHLNNVR RFPTENVAVG TEKGGSGWNG YECKTCYRTF PSFQALGGHR ASHKKPKAME  240
AEKKLHLSSE YEEMQFRNNI TNSLCLQLNQ RGSLYSSGKA KVHECAICGA EFTSGQALGG  300
HMRRHRAMPV GTNTALSLTP MAIETEDQRQ PKRQRSVLSL DFDLNLPAPQ EHDQRESFLI  360
KSNQQPQQQQ HNKQQEQQQQ QQPLVFPART LVDCHY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G04390.17e-61C2H2 family protein