PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022956068.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NF-YA
Protein Properties Length: 322aa    MW: 35659.4 Da    PI: 8.8983
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022956068.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA95.75.4e-30154210158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     dep+YVNaKQy++I++RRq Rak+  +++  +++rkpy+heSRh hA+rRpRgsgGrF
  XP_022956068.1 154 DEPIYVNAKQYHGIIRRRQIRAKAMMKNRP-ARTRKPYIHESRHLHAMRRPRGSGGRF 210
                     79****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
MAPQTGYLKE HEGIVPNSLG QLSSSPTRLW SAAFGLGSHS IFGDFGQVKE QLDSNGKEFA  60
ATKQAAHGLE KLNTAPFSIY PGDTKNSVDA QKPSPVFSLQ SPLSEYHNPF ELGFSQPLTC  120
ENYPYMEQHY GIISAYGPQI PGRVMLPMRL TTDDEPIYVN AKQYHGIIRR RQIRAKAMMK  180
NRPARTRKPY IHESRHLHAM RRPRGSGGRF LNMKNQPNEK SSMVPKKVDD VNLSDLTGSQ  240
CSEVLQSESG TLNSQNEAKD GRGFNLLSSE VSSMFSRGLQ RFQINHIGPS MQSLAEIIDG  300
GGHGMVLPKW VAAADNCCDL CF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.24e-58NF-YA family protein