PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955594.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 886aa MW: 98166.5 Da PI: 6.5642

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955594.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	55.5	1.2e-17	4	45	76	117
CG-1 76 ggvevlycyYahseenptfqrrcywlLeeelekivlvhylev 117 g+v+vl+cyYah+e+n +fqrr+yw+L+e+le+ivlvhy+ev XP_022955594.1 4 GSVDVLHCYYAHGEDNDNFQRRSYWMLDEQLEHIVLVHYREV 45 579*************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MVSGSVDVLH CYYAHGEDND NFQRRSYWML DEQLEHIVLV HYREVNEGYR SGISRVSVDP 60 GSLAEGCQGG STPIFMQETS LVGSVHTSSP LSPMQTVRSE NGGVDSSARN DSGISSDVHH 120 VFKSSMLPAS LPAGDVSGSS DLCGQEIVII QSAITDSITH KLIDARLASS GLVKNMVNSG 180 HGLIADEEVP AAKAVSQRIV QKKKHGLITV PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE 240 GFGELKKLDS FGRWMDKEIG RDCDDSLMTL DSGNYWCALD AGNDEKEVSS LSHHMQLDID 300 SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV LIVGSFLGSK KLPVETQWGC MFGEVEVSAE 360 VLSNSVLRCQ TPLHAPGRIP FYVTCCNRLA CSEVREFEFR EKLPTLSVPN AIKCASEDEL 420 RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK IIGLMKSSRS DIAKWRMMEG ISIPLISDGM 480 NPRDFMIQTL LVDKLCEWLA CKVHEGTMGT HVLDEEGLGV IHLAAALGYA WTIGPIIASG 540 VSPNFRDSKG RTALHWASYF GREETVATLV RLGVSPGAVD DPTSGFPGGQ TAADLASSRG 600 HKGIAGYLAE ADLIAHLRSL TDGENLKDNV KENVNVDETI QTADVVSSQL AEDELLSLKG 660 SLAAVRKSVH AAALIHAAFR ARSFRHKQLM GSDKEMIHEE SVDLVALGIL NKAEKIHYED 720 YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV KIQAHVRGYQ VRKLYRKVIW TVSIVEKAIL 780 RWRRKRVGLR GFKAEGATGE VASSHSQVEK SDDYEFLRIG RQLKYADVEK ALSRVKSMAR 840 SPEARHQYMR LVTKFHIFKQ INDEEPSGSN EDGSSQEIQK EEQNLA

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MVSGSVDVLH CYYAHGEDND NFQRRSYWML DEQLEHIVLV HYREVNEGYR SGISRVSVDP  60
GSLAEGCQGG STPIFMQETS LVGSVHTSSP LSPMQTVRSE NGGVDSSARN DSGISSDVHH  120
VFKSSMLPAS LPAGDVSGSS DLCGQEIVII QSAITDSITH KLIDARLASS GLVKNMVNSG  180
HGLIADEEVP AAKAVSQRIV QKKKHGLITV PLFGMCTDSQ VVDDSFVQVE KTSKYDLNHE  240
GFGELKKLDS FGRWMDKEIG RDCDDSLMTL DSGNYWCALD AGNDEKEVSS LSHHMQLDID  300
SLGPSLSQDQ LFSISDFSPD WAYSGNVTKV LIVGSFLGSK KLPVETQWGC MFGEVEVSAE  360
VLSNSVLRCQ TPLHAPGRIP FYVTCCNRLA CSEVREFEFR EKLPTLSVPN AIKCASEDEL  420
RFQMRLTRLL NLCLEEKWLD CSIKNCEKCK IIGLMKSSRS DIAKWRMMEG ISIPLISDGM  480
NPRDFMIQTL LVDKLCEWLA CKVHEGTMGT HVLDEEGLGV IHLAAALGYA WTIGPIIASG  540
VSPNFRDSKG RTALHWASYF GREETVATLV RLGVSPGAVD DPTSGFPGGQ TAADLASSRG  600
HKGIAGYLAE ADLIAHLRSL TDGENLKDNV KENVNVDETI QTADVVSSQL AEDELLSLKG  660
SLAAVRKSVH AAALIHAAFR ARSFRHKQLM GSDKEMIHEE SVDLVALGIL NKAEKIHYED  720
YLHVAAVRIQ QNYRGWKGRK EFLKIRNRIV KIQAHVRGYQ VRKLYRKVIW TVSIVEKAIL  780
RWRRKRVGLR GFKAEGATGE VASSHSQVEK SDDYEFLRIG RQLKYADVEK ALSRVKSMAR  840
SPEARHQYMR LVTKFHIFKQ INDEEPSGSN EDGSSQEIQK EEQNLA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G09410.2	1e-151	CAMTA family protein