PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955591.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 972aa MW: 108570 Da PI: 7.2461

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955591.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	176	5e-55	20	135	3	117
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwl++ ei++iL n++k++l+ +++ +p+ gsl+L++rk +ryfrkDG++w+kkkdgktv+E+hekLK g+v+vl+cyYah+e+n +fqr XP_022955591.1 20 QEaQNRWLRPAEICEILRNYQKFQLAPDPPVQPPAGSLFLFDRKALRYFRKDGHKWRKKKDGKTVKEAHEKLKSGSVDVLHCYYAHGEDNDNFQR 114 5559***************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhylev 117 r+yw+L+e+le+ivlvhy+ev XP_022955591.1 115 RSYWMLDEQLEHIVLVHYREV 135 *****************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 972 aa Download sequence
MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF 60 DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML 120 DEQLEHIVLV HYREVNEGYR SGISRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP 180 LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI 240 TDSITHKLID ARLASSGLVK NMVNSGHGLI ADEEVPAAKA VSQRIVQKKK HGLITVPLFG 300 MCTDSQVVDD SFVQVEKTSK YDLNHEGFGE LKKLDSFGRW MDKEIGRDCD DSLMTLDSGN 360 YWCALDAGND EKEVSSLSHH MQLDIDSLGP SLSQDQLFSI SDFSPDWAYS GNVTKVLIVG 420 SFLGSKKLPV ETQWGCMFGE VEVSAEVLSN SVLRCQTPLH APGRIPFYVT CCNRLACSEV 480 REFEFREKLP TLSVPNAIKC ASEDELRFQM RLTRLLNLCL EEKWLDCSIK NCEKCKIIGL 540 MKSSRSDIAK WRMMEGISIP LISDGMNPRD FMIQTLLVDK LCEWLACKVH EGTMGTHVLD 600 EEGLGVIHLA AALGYAWTIG PIIASGVSPN FRDSKGRTAL HWASYFGREE TVATLVRLGV 660 SPGAVDDPTS GFPGGQTAAD LASSRGHKGI AGYLAEADLI AHLRSLTDGE NLKDNVKENV 720 NVDETIQTAD VVSSQLAEDE LLSLKGSLAA VRKSVHAAAL IHAAFRARSF RHKQLMGSDK 780 EMIHEESVDL VALGILNKAE KIHYEDYLHV AAVRIQQNYR GWKGRKEFLK IRNRIVKIQA 840 HVRGYQVRKL YRKVIWTVSI VEKAILRWRR KRVGLRGFKA EGATGEVASS HSQVEKSDDY 900 EFLRIGRQLK YADVEKALSR VKSMARSPEA RHQYMRLVTK FHIFKQINDE EPSGSNEDGS 960 SQEIQKEEQN LA

Sequence ? help Back to Top

Protein Sequence Length: 972 aa Download sequence

MAESRRYVPI QHLDLVQILQ EAQNRWLRPA EICEILRNYQ KFQLAPDPPV QPPAGSLFLF  60
DRKALRYFRK DGHKWRKKKD GKTVKEAHEK LKSGSVDVLH CYYAHGEDND NFQRRSYWML  120
DEQLEHIVLV HYREVNEGYR SGISRVSVDP GSLAEGCQGG STPIFMQETS LVGSVHTSSP  180
LSPMQTVRSE NGGVDSSARN DSGISSDVHH VFKSSMLPAS LPAGSSDLCG QEIVIIQSAI  240
TDSITHKLID ARLASSGLVK NMVNSGHGLI ADEEVPAAKA VSQRIVQKKK HGLITVPLFG  300
MCTDSQVVDD SFVQVEKTSK YDLNHEGFGE LKKLDSFGRW MDKEIGRDCD DSLMTLDSGN  360
YWCALDAGND EKEVSSLSHH MQLDIDSLGP SLSQDQLFSI SDFSPDWAYS GNVTKVLIVG  420
SFLGSKKLPV ETQWGCMFGE VEVSAEVLSN SVLRCQTPLH APGRIPFYVT CCNRLACSEV  480
REFEFREKLP TLSVPNAIKC ASEDELRFQM RLTRLLNLCL EEKWLDCSIK NCEKCKIIGL  540
MKSSRSDIAK WRMMEGISIP LISDGMNPRD FMIQTLLVDK LCEWLACKVH EGTMGTHVLD  600
EEGLGVIHLA AALGYAWTIG PIIASGVSPN FRDSKGRTAL HWASYFGREE TVATLVRLGV  660
SPGAVDDPTS GFPGGQTAAD LASSRGHKGI AGYLAEADLI AHLRSLTDGE NLKDNVKENV  720
NVDETIQTAD VVSSQLAEDE LLSLKGSLAA VRKSVHAAAL IHAAFRARSF RHKQLMGSDK  780
EMIHEESVDL VALGILNKAE KIHYEDYLHV AAVRIQQNYR GWKGRKEFLK IRNRIVKIQA  840
HVRGYQVRKL YRKVIWTVSI VEKAILRWRR KRVGLRGFKA EGATGEVASS HSQVEKSDDY  900
EFLRIGRQLK YADVEKALSR VKSMARSPEA RHQYMRLVTK FHIFKQINDE EPSGSNEDGS  960
SQEIQKEEQN LA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G22300.2	1e-144	CAMTA family protein