PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022955435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | C2H2 | ||||||||
Protein Properties | Length: 266aa MW: 28400.6 Da PI: 8.1755 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.5 | 0.00021 | 85 | 107 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C + F ++ L H++ H XP_022955435.1 85 FSCNYCQRKFYSSQALGGHQNAH 107 89*****************9988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 266 aa Download sequence |
MNLPISEPSP SETSTIISAS ESSPSCPRGD PTTDQINLNS HLGLDLTLSN NDSDHGSNPE 60 LNLIHSFDAN LATEPTDGET EPRVFSCNYC QRKFYSSQAL GGHQNAHKRE RTLAKRTQRI 120 GTGSNFGLPH RYSSLASLPL HGSLSRSLGI QAHSMVHKPS LHVSAIGSAG IYGHSEWSRK 180 PLDQHPAIGR LMQGNSHVGS FRGISSDTGA ARFEGVGKLS PAAATEAPPP HGGFWWGSGG 240 GGGGFNHLKM KPKQDELLKL DLSLKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G10970.1 | 8e-45 | C2H2 family protein |