PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955361.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

bHLH

Protein Properties

Length: 343aa MW: 37698.9 Da PI: 5.931

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955361.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	15.3	3.6e-05	36	54	2	20
HHHHHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsaf 20 r +h+e E+rRR++iN+++ XP_022955361.1 36 RSKHSETEQRRRSKINERI 54 899**************98 PP
2	HLH	26.2	1.5e-08	71	103	19	55
HHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 19 afeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +f+ Lr+l+P++ ++K +Ka+ L +++eYI+ Lq XP_022955361.1 71 RFQILRDLIPQN----DQKRDKASFLLEVIEYIQFLQ 103 79*******9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISC 60 FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWSSEP 120 SKLVPWNYRA AESYVDHSQV VKRGPNHESA VVFSQAMLTN APNVMDADMG PAAVLNAVDH 180 TLVSATQGLP MSMHAQPIVF EPVGRGSLST ESLDEPASGS ENISSKTQTE LLQGRTHATT 240 GFLNHAVSDQ EDLSVESEME GISGVYSHGL LSTLTQALQA SGVDLSQTNI SVKVDVGRRA 300 NRSLSLSEDD KKQSLNNQVT AQSLHGYFSE DSEQAHKKLR TGV

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

MVKSSKSVHE RFQDDGNELG VKIEGKSGES KASGHRSKHS ETEQRRRSKI NERIFVTISC  60
FCEILCSDGG RFQILRDLIP QNDQKRDKAS FLLEVIEYIQ FLQEKLNMYE GSCQGWSSEP  120
SKLVPWNYRA AESYVDHSQV VKRGPNHESA VVFSQAMLTN APNVMDADMG PAAVLNAVDH  180
TLVSATQGLP MSMHAQPIVF EPVGRGSLST ESLDEPASGS ENISSKTQTE LLQGRTHATT  240
GFLNHAVSDQ EDLSVESEME GISGVYSHGL LSTLTQALQA SGVDLSQTNI SVKVDVGRRA  300
NRSLSLSEDD KKQSLNNQVT AQSLHGYFSE DSEQAHKKLR TGV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69010.1	2e-50	bHLH family protein