PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022955355.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 348aa    MW: 36737.8 Da    PI: 9.0401
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022955355.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.29.7e-11282327655
                     HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     +++Er RR ri  ++ +L++l+P+     +k  s +++L +Av++Ik Lq
  XP_022955355.1 282 SIAERERRTRISGKLKKLQDLVPNM----DKQTSYSDMLDLAVQHIKGLQ 327
                     689*********************7....688*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 348 aa     Download sequence    
MRHMYQSNSS SSSSQKFMAS ANAGVGSGGG GGGSGGGLTR YGSAPGSLLT SAVDSVIGSR  60
HPDSVSSLRT PPSFSGHYFS SADSSLKTSS STAAAARSYG IHDLALGDFS TARNFNSNGG  120
QSSCSSPLVR QKSSPAGFLG HLSVAERNGG GFSLTMGGGG NGIGRLKSQV RMNGQDSLSQ  180
ISEMNESFME AANSSANGLT PSTFGMDSSW DTSNNSIVFG APHAKTSRHH PDAEFFTTLE  240
SQFSMPQTTL EMATVERLLH IPEHSAPCKI RAKRGCATHP RSIAERERRT RISGKLKKLQ  300
DLVPNMDKQT SYSDMLDLAV QHIKGLQHQI QMLNKEAESC TCGNKECL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G05805.16e-65bHLH family protein