PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955333.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

Dof

Protein Properties

Length: 333aa MW: 36714.9 Da PI: 7.1915

Description

Dof family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955333.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-Dof	127.2	5e-40	52	111	2	61
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +++alkcprCdst+tkfCyynnyslsqPryfCk+CrryWtkGG+lrn+PvGgg+rknkk+ XP_022955333.1 52 HDQALKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKV 111 7899******************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 333 aa Download sequence
MGLTSLQVCM DSSDWLQQGS GNEESGMDCS SLSGDMLSCS RPLTERRLRP QHDQALKCPR 60 CDSTHTKFCY YNNYSLSQPR YFCKTCRRYW TKGGTLRNIP VGGGCRKNKK VTTTKKSNND 120 PIHHQQQQQP RQPISQIHHH HIASSSSSSL HNHNPTDLHL SFSNQVHFPS QFNPLIGTPN 180 FISSIGMLEA HHHTARPIDF MDSKMEALVG NAHYNPTNSD HLAMVGGFAG DHIAAAGHAL 240 SPSFHGLCTP YGLSLDGNAA GMGQGVMIPY EHEQNEDPNA MEVKPNTKLL ALEWQDQEGC 300 SEKVESYGFI NGIGSSWNGM MNGYGSSTTN PLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G62940.1	6e-45	Dof family protein