PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022955048.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

NF-X1

Protein Properties

Length: 1103aa MW: 120129 Da PI: 8.1699

Description

NF-X1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022955048.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-NF-X1	21.4	5.3e-07	296	314	1	19
zf-NF-X1 1 CGkHkCqklCHeGpCppCp 19 CG+H+C+k+CH+GpC++C+ XP_022955048.1 296 CGHHRCEKICHLGPCDSCQ 314 ******************6 PP
2	zf-NF-X1	21.7	4.5e-07	418	435	1	18
zf-NF-X1 1 CGkHkCqklCHeGpCppC 18 CGkH+C+ CH G+C pC XP_022955048.1 418 CGKHRCKDVCHAGDCAPC 435 ****************** PP
3	zf-NF-X1	16.2	2.4e-05	514	533	1	20
zf-NF-X1 1 CGkHkCqklCHeGpCppCpq 20 CG+H+C++lCH G C pCp+ XP_022955048.1 514 CGQHSCESLCHSGHCSPCPE 533 ******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1103 aa Download sequence
MSSHVRNVRK DRLRFPASSA RQTWVPRGST TTTTTTTTTT ATHVNQPLNV DLSDNRDGRE 60 LNSSPHPVNR DGGNHGPRVH MGPRRNQRKD KEKDKEKSGD QGVKELRNSN LPQLVHEIQE 120 KLTKGTVECM ICYDMVRRSA PIWSCSSCFC IFHLTCIKKW ARAPTSTDLV AEKNQGLNWR 180 CPGCQSVQLT SSKEIRYVCF CGKRQEPQSD LYLTPHSCGE PCGKPLDREM LIAGGSKENL 240 CPHNCVLQCH PGPCPPCKAF APPRLCPCGK KLITTRCSDR KSTLTCGQRC EKLLDCGHHR 300 CEKICHLGPC DSCQVLISAS CFCKKKKELV LCGSITLKGE VNAEDGVFPC SLICGKILNC 360 RNHFCSEICH PGPCGGCVLV PDMIKTCYCG KTPLQKERTS CLDPIPVCSE LCEKLLPCGK 420 HRCKDVCHAG DCAPCLVQVV QKCRCGSTSQ NVECYKTSSP TDIFTCEKPC GWKKNCGRHR 480 CSERCCPLSN SSYSHSGDWD PHFCVLRCGK KLRCGQHSCE SLCHSGHCSP CPETIFTDLT 540 CACGKTSIPP PLPCGTPPPS CQLPCSVPQP CGHSSTHSCH FGDCPPCTVP IAKECIGGHV 600 VLRNIPCGSR DIRCNKLCGK TRQCGIHACN RTCHPPPCDT SAGSDSGQKT SCGQTCGAPR 660 RDCRHTCTAP CHRSAPCPDA RCEFPVIITC SCGRITASVP CDAGGSGTGF NTDTLYASII 720 QKLPAPLQPI EATSKKVPLG QRKLMCDDEC SKLERKRVLA DAFDINPPNL DALHFGDSSA 780 SELLADLFRR DSKWVLSVEE RCKFLVLGKN RGAMSGLKVH VFCPMPKDKR DAVRLIAERW 840 KLAINSVGWE PKRFIAIHVT PKSKVPPRVL GIKGSTTTST PHPPAYDPLV DMDPRLVVSF 900 PDLPREADIS ALVLRFGGEC ELVWLNDKNA LAVFSDPARA ATAMRRLDHG TAYHGASFLQ 960 NGGASASSNG NAWGGENANK EGGALKSSNP WKRAVVQDSS WKETSWGDEE WSGPSIDVQA 1020 SVWKREAPLP ASLNRWHALD PESSGSSSAQ SVEHNPGSRV GRSSSSGSES GTSRSLNSLG 1080 TQVVADNETN MSEVADDWEK AYD

Sequence ? help Back to Top

Protein Sequence Length: 1103 aa Download sequence

MSSHVRNVRK DRLRFPASSA RQTWVPRGST TTTTTTTTTT ATHVNQPLNV DLSDNRDGRE  60
LNSSPHPVNR DGGNHGPRVH MGPRRNQRKD KEKDKEKSGD QGVKELRNSN LPQLVHEIQE  120
KLTKGTVECM ICYDMVRRSA PIWSCSSCFC IFHLTCIKKW ARAPTSTDLV AEKNQGLNWR  180
CPGCQSVQLT SSKEIRYVCF CGKRQEPQSD LYLTPHSCGE PCGKPLDREM LIAGGSKENL  240
CPHNCVLQCH PGPCPPCKAF APPRLCPCGK KLITTRCSDR KSTLTCGQRC EKLLDCGHHR  300
CEKICHLGPC DSCQVLISAS CFCKKKKELV LCGSITLKGE VNAEDGVFPC SLICGKILNC  360
RNHFCSEICH PGPCGGCVLV PDMIKTCYCG KTPLQKERTS CLDPIPVCSE LCEKLLPCGK  420
HRCKDVCHAG DCAPCLVQVV QKCRCGSTSQ NVECYKTSSP TDIFTCEKPC GWKKNCGRHR  480
CSERCCPLSN SSYSHSGDWD PHFCVLRCGK KLRCGQHSCE SLCHSGHCSP CPETIFTDLT  540
CACGKTSIPP PLPCGTPPPS CQLPCSVPQP CGHSSTHSCH FGDCPPCTVP IAKECIGGHV  600
VLRNIPCGSR DIRCNKLCGK TRQCGIHACN RTCHPPPCDT SAGSDSGQKT SCGQTCGAPR  660
RDCRHTCTAP CHRSAPCPDA RCEFPVIITC SCGRITASVP CDAGGSGTGF NTDTLYASII  720
QKLPAPLQPI EATSKKVPLG QRKLMCDDEC SKLERKRVLA DAFDINPPNL DALHFGDSSA  780
SELLADLFRR DSKWVLSVEE RCKFLVLGKN RGAMSGLKVH VFCPMPKDKR DAVRLIAERW  840
KLAINSVGWE PKRFIAIHVT PKSKVPPRVL GIKGSTTTST PHPPAYDPLV DMDPRLVVSF  900
PDLPREADIS ALVLRFGGEC ELVWLNDKNA LAVFSDPARA ATAMRRLDHG TAYHGASFLQ  960
NGGASASSNG NAWGGENANK EGGALKSSNP WKRAVVQDSS WKETSWGDEE WSGPSIDVQA  1020
SVWKREAPLP ASLNRWHALD PESSGSSSAQ SVEHNPGSRV GRSSSSGSES GTSRSLNSLG  1080
TQVVADNETN MSEVADDWEK AYD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10170.1	0.0	NF-X1 family protein