PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954868.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family NAC
Protein Properties Length: 296aa    MW: 33802.2 Da    PI: 7.0029
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954868.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM169.11.4e-5281321128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95 
                     lppGfrFhPtdeelv +yL+++++++++ +  vi+e+d+yk++PwdLp+++ ++ekewyfFs+r++ky++g+r+nra+ sgyWkatg dk++ + 
  XP_022954868.1   8 LPPGFRFHPTDEELVIHYLCRRCASQPIAV-PVIAEIDLYKFDPWDLPEMALHGEKEWYFFSPRERKYPNGSRPNRAAGSGYWKATGADKPIGR- 100
                     79**************************99.89***************77778899************************************98. PP

             NAM  96 kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       + vg+kk Lvfy+g+ap+gekt+W+mheyrl
  XP_022954868.1 101 -PKPVGIKKALVFYTGKAPRGEKTNWIMHEYRL 132
                     .789***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MTAGMIQLPP GFRFHPTDEE LVIHYLCRRC ASQPIAVPVI AEIDLYKFDP WDLPEMALHG  60
EKEWYFFSPR ERKYPNGSRP NRAAGSGYWK ATGADKPIGR PKPVGIKKAL VFYTGKAPRG  120
EKTNWIMHEY RLADVDRSAR NKNSLRLDDW VLCRIYNKKG VIDKRNHAAV NRNTNGFKVE  180
MEDEKPNIFA NHGGDGGFMP AVTAVPASVD DCIHFETSDS IPRLHADSSC SEHVVSPEFA  240
TSEVQSEPKW KEFQNAFDFR YNYIDNSLDQ EFATPFQGGN QMSPLQDMFM YLQKPF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.11e-140NAC family protein