PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022954639.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | bHLH | ||||||||
Protein Properties | Length: 163aa MW: 18400.3 Da PI: 10.5199 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 37.2 | 5.4e-12 | 11 | 58 | 5 | 55 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 + E+ RR+r+N++f eL ++l + +s+K +K+ iL Av+ I +L+ XP_022954639.1 11 KAHKEKVRRNRLNDRFLELNSILNHG---TSPKIDKSVILGDAVRMILQLR 58 5678*********************9...9*******************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 163 aa Download sequence |
MSPGSSASLS KAHKEKVRRN RLNDRFLELN SILNHGTSPK IDKSVILGDA VRMILQLRDE 60 AQKLKESNEN FLEKINEMKA EKNELRDEKQ RLKEAKDNLK QKMKTFITQP SFLPHPPPFS 120 APNHVVGAKF VPVIGYPGVS MWKLMPPGAI DTSQDHVLRP PVA |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G54680.1 | 3e-65 | bHLH family protein |