PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954372.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

MYB_related

Protein Properties

Length: 1374aa MW: 151209 Da PI: 8.1162

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954372.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.5	1.5e-08	974	1014	3	45
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 WT E l+++av+ +G++ ++ I+ ++g ++ qck ++ XP_022954372.1 974 YWTDGEKSLFIEAVTVYGKN-FSMISTHVG-SKSMDQCKVFFS 1014 5***************99.*****.******8776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1374 aa Download sequence
MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG 60 GWHVFSDDYG HGYGPSMSFN NKILENVNSR PSISHGHGKY ARNSRESRSF SQRDWKSHSW 120 ATSNGSTNNG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT 180 NQRRDRDYSL SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQSVS 240 QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGT VFTIVNAEAT 300 QSLNSSLIDK GPRGGSGFFD CTSPATPSSV ICGSSPGGDE KSSGKASSDN DVNNFGSPGS 360 GFQNQYEGSP ASNLEKLDRF SIPNLGSPLS QLLQSTDSTS VDSRVVSFTA LSKLLAYKKE 420 ISKVLEMTET EIDLLENELK GLRPGSKGYF SSFPLASSSL PVGHKCFEEH NNVTDTIPPV 480 ATLPVVTSTN NNSITMPHST SDSEEVHADV KENDQSDAKE SVIMKEKLTL TGCSVEDNVV 540 ASVDNNMLMK SEGLALEPIS SDIYEYADEG GDNVFDLILA SNKKSAREAS EALIRLLPAN 600 ERKIDIWSTN ACSQNQCALK ERFAKRKKLI RFKERVIALK FRAYQSLWKE SLHVPPVRNL 660 RTKSQKKYQL SLWTNYSAYQ KNRSSIRFRM PSPGNLNPVS NTEILKHVSK QLSNPQTKQY 720 RKTLKMPTLI LDKKDKMASR FISNNGLVED PCAVEKERMM INPWTSEEKD VFMEKLEYFG 780 KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKAKSSTSNY LMTTGKKWNP 840 ETNAASLDIL GTASAMTACA HKYSSSRSGG RTACYTTQFD DNLSERAKSF HSFGNEREKV 900 AADVLAGICG SLSSEAMGSS CITGNFHRRD GSQDLKCKKG ATTILRRRMT ANLLQSVDDE 960 VCSDESCGEM DPSYWTDGEK SLFIEAVTVY GKNFSMISTH VGSKSMDQCK VFFSKARKCL 1020 GLDLICSAKK MPANGRDCNA NGFPCEAGVD RNAFPCDEGV GNGGELESMN PQSTHQEVKE 1080 INNHSNTAVD AMVSDACHRK DSSHSALDED CQSVNSANDK NRSLHNHAVV SDETAKEQGN 1140 SSRVTVSVGN GLDAETKRGN IGQGAKAPAH TADSSSAPLN SHVTSVPKDE QGRLHVRVRS 1200 RSLSDSEQLS INGDVKLFGQ ILTHSSSVPS SSSNGNRTQR KFKRRLKASS HGNLSTAKFS 1260 RKSSSGQEDV PSRSYGIWDG TQMRNGLSSL PDPTTLLSRY PTFDNSSKST SPIEQQQPLL 1320 NEQKSNCDSQ MSEVNSSKVA QEVVGGIIVG EICNDDDDAL DTKLHRNKAE DGGS

Sequence ? help Back to Top

Protein Sequence Length: 1374 aa Download sequence

MPPEPLPWDR KDFFKERKHE RSEFLGPVPR WRDSSSHGSR EFSRWGSGDF RRPPGHGRQG  60
GWHVFSDDYG HGYGPSMSFN NKILENVNSR PSISHGHGKY ARNSRESRSF SQRDWKSHSW  120
ATSNGSTNNG GRLQHDLNYD QRSVHDMLIY PSHSHSDFVN PRDKVKGQHD KIDDFNGLGT  180
NQRRDRDYSL SSSGWKPLKW TRSGGLSSRT STSGHSSSTK GIDALDSNET KSETVLQSVS  240
QNLSPSADHA ECARSSLPCD EANAKKKPRL GWGEGLAKYE KKKVEIPDGT VFTIVNAEAT  300
QSLNSSLIDK GPRGGSGFFD CTSPATPSSV ICGSSPGGDE KSSGKASSDN DVNNFGSPGS  360
GFQNQYEGSP ASNLEKLDRF SIPNLGSPLS QLLQSTDSTS VDSRVVSFTA LSKLLAYKKE  420
ISKVLEMTET EIDLLENELK GLRPGSKGYF SSFPLASSSL PVGHKCFEEH NNVTDTIPPV  480
ATLPVVTSTN NNSITMPHST SDSEEVHADV KENDQSDAKE SVIMKEKLTL TGCSVEDNVV  540
ASVDNNMLMK SEGLALEPIS SDIYEYADEG GDNVFDLILA SNKKSAREAS EALIRLLPAN  600
ERKIDIWSTN ACSQNQCALK ERFAKRKKLI RFKERVIALK FRAYQSLWKE SLHVPPVRNL  660
RTKSQKKYQL SLWTNYSAYQ KNRSSIRFRM PSPGNLNPVS NTEILKHVSK QLSNPQTKQY  720
RKTLKMPTLI LDKKDKMASR FISNNGLVED PCAVEKERMM INPWTSEEKD VFMEKLEYFG  780
KDFGKIASFL DHKTTADCIE FYYKNHKSDC FEKTKKLEFG KKAKSSTSNY LMTTGKKWNP  840
ETNAASLDIL GTASAMTACA HKYSSSRSGG RTACYTTQFD DNLSERAKSF HSFGNEREKV  900
AADVLAGICG SLSSEAMGSS CITGNFHRRD GSQDLKCKKG ATTILRRRMT ANLLQSVDDE  960
VCSDESCGEM DPSYWTDGEK SLFIEAVTVY GKNFSMISTH VGSKSMDQCK VFFSKARKCL  1020
GLDLICSAKK MPANGRDCNA NGFPCEAGVD RNAFPCDEGV GNGGELESMN PQSTHQEVKE  1080
INNHSNTAVD AMVSDACHRK DSSHSALDED CQSVNSANDK NRSLHNHAVV SDETAKEQGN  1140
SSRVTVSVGN GLDAETKRGN IGQGAKAPAH TADSSSAPLN SHVTSVPKDE QGRLHVRVRS  1200
RSLSDSEQLS INGDVKLFGQ ILTHSSSVPS SSSNGNRTQR KFKRRLKASS HGNLSTAKFS  1260
RKSSSGQEDV PSRSYGIWDG TQMRNGLSSL PDPTTLLSRY PTFDNSSKST SPIEQQQPLL  1320
NEQKSNCDSQ MSEVNSSKVA QEVVGGIIVG EICNDDDDAL DTKLHRNKAE DGGS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G52250.1	1e-133	MYB family protein