PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954256.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 486aa    MW: 56039.1 Da    PI: 8.6323
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954256.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.41.2e-08431454125
                     --S---SGGGGTS--TTTTT-SS-S CS
         zf-CCCH   1 yktelCrffartGtCkyGdrCkFaH 25 
                     yk+ +Cr++a  G C+yG++CkF+H
  XP_022954256.1 431 YKQQRCRYYAV-GRCHYGENCKFSH 454
                     99*********.************* PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MAFSGNFVTD PRRFELEELI DDHGESDDQC DSDDSECDPS YSFEEDTNSK VSRISIRKKS  60
KPSEVEDREL IAQAYLDDVV PEVLNLNEND EKDISEVLSI IKAGKLEKLK VEQCKAYLRK  120
NGLRLTGTKD VLIQRINEHL EILNGGGEKK YPEYSFTVNC KGDACMGDVV MFEQKVYEMY  180
NIASRSSIGP SCGTRIVAGR IVKESYGASK QQHTFTIEVL WSKGEKPLPP LHPLLIKGRN  240
LYRMKTMRQT WEDEGERQKV LMEKHARGSL ARSTREARVV EKEKRKTHNE NRKSRREGFS  300
ENPSQSNLSS AGTMLAETMV KLSVDARKAV HPHQERPLFG NSGEPPRQHN PTKQTKSDVF  360
IDHSRRPYQL QPMMNPVQNN YFSQPQMKAD PPPVSYNIHP SIYRADYPAS RLAMGQMNLY  420
PKVNQHAQES YKQQRCRYYA VGRCHYGENC KFSHEMTQDF AGREKERLGR HHHHHHQMHQ  480
NARLCR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1284288KRKTH