PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_022954224.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
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Family | MYB_related | ||||||||
Protein Properties | Length: 425aa MW: 47429 Da PI: 10.2339 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.5 | 3e-08 | 110 | 151 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +WT+eE ++l d+++++ + + Ia +++ +Rt +++k+r++ XP_022954224.1 110 SWTKEETDQLFDLCERFDLR-FVVIADRFPSTRTVEELKERYY 151 7*******************.*********************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 425 aa Download sequence |
MDAKDILGLP KNTLPLSQEK KPRAQKDAQR KRDGISREVY ALTGGLAPIM PAIDTSELKK 60 RPPSDEKITW QWLPFSNSAR KDNLQLYHWV RVVNGIPPTG DYSFAKYNKS WTKEETDQLF 120 DLCERFDLRF VVIADRFPST RTVEELKERY YHASKAILGA RGPTSREGLG NTPAKDPFNV 180 SQEIDRKRAL SMVLSQTKQN ERKDAEVLAE AKKIIESRKA ERVAEESKLA VTSNAVPEVT 240 ERAVVPGESV PSVSNVQPPP PAAVPSTVVA DNASTLASLR MLPVYLRTYA LEQMVHAASS 300 SAGLRTIKRV EQTLQDLSVN LKPRVPTKAV CAEHLELRKE ILTLLNLQKQ LQNKEAEGSS 360 FRESPYSEAP GTPKERAFIA DSMSFGGERF VKRDQKRKAT GRLSEAPSSP AQSNKRPRKQ 420 KGSDL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 20 | 32 | KKPRAQKDAQRKR |
2 | 391 | 397 | VKRDQKR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G47210.1 | 1e-176 | MYB_related family protein |