PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954085.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 931aa MW: 104427 Da PI: 6.4379

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954085.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	173.8	2.4e-54	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_022954085.1 13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 107 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+++ ++ivlvhy++ XP_022954085.1 108 RSYWMLDQSCDHIVLVHYRD 127 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 931 aa Download sequence
MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF 60 FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI 120 VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHSLSPGSV EVSSETGNRT 180 IGSNGVDRQY EKSELKSSND RDVSQALRRI EEQLSLNEDS WKDIGPYYGH EEGSNFNLID 240 YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL 300 DSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRKWLDS GGITFPMLGS CTSPEYASPL 360 DTHDDNSNYH ISFLKQDHGN SLEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF 420 LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY 480 KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW 540 SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGCSLS KKEQGVIHMI 600 SGLGYVWALN PILSCGVNIN FRDINGWTAL HWAARFGREK MVAALIASGA SAGAVTDPSS 660 QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS 720 KGNLSSAEDC IPLKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP 780 NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR 840 KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE 900 AVSRVLSMVD SPDACQQYHR MLEGFREAKR K

Sequence ? help Back to Top

Protein Sequence Length: 931 aa Download sequence

MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF  60
FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI  120
VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHSLSPGSV EVSSETGNRT  180
IGSNGVDRQY EKSELKSSND RDVSQALRRI EEQLSLNEDS WKDIGPYYGH EEGSNFNLID  240
YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL  300
DSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRKWLDS GGITFPMLGS CTSPEYASPL  360
DTHDDNSNYH ISFLKQDHGN SLEVDTSLIV AQVQKFTIRQ IVPEQGYATE STKVIIIGSF  420
LCDPSKAPWA CMFGDIEVPL QVVQNGVLCF EAPPHLPGKV AFFITSGNRE PCSEVREFEY  480
KMNVCSHCQS HSSGATKSPE ELLLLVRLVQ LLLSDSLMQK FDEVDSEVRS NNLKAGDDQW  540
SSLIEALLVG SETPSGTMDW LLQELLKDKL YLWLSSQKKD RHDLAGCSLS KKEQGVIHMI  600
SGLGYVWALN PILSCGVNIN FRDINGWTAL HWAARFGREK MVAALIASGA SAGAVTDPSS  660
QDRDGKTAAS IADIHGHKGL AGYLSEVALT SHLSSLTFEE GELSNGSAEI EAEITVNCIS  720
KGNLSSAEDC IPLKNTLAAV RNAAQAAARI QSAFRAHSFR KRQQKEATFA ACIDEYGIDP  780
NDIQGLLAMS KLNFSNRRDY NAAALSIQKK YRGWKGRREF LSMRQKVVKI QAHVRGYQAR  840
KHHKIICWAV GILDKAVLRW RRKGVGLRGF RSEIGSIDES EDGDIIKVFR KQKVEGTIDE  900
AVSRVLSMVD SPDACQQYHR MLEGFREAKR K

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein