PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022954084.1

Organism

Cucurbita moschata

Taxonomic ID

3662

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita

Family

CAMTA

Protein Properties

Length: 944aa MW: 105636 Da PI: 6.2381

Description

CAMTA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022954084.1	genome	NCBI	View Nucleic Acid

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	CG-1	173.8	2.4e-54	13	127	3	116
CG-1 3 ke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqr 96 +e ++rwlk+ e++ iL+n+ek++lt+e++++p+sgsl+L+n++++r+fr+DG++w+kk+dg+tv E+he+LKvg+ e+l+cyYah+e+np+fqr XP_022954084.1 13 REaQTRWLKPPEVLFILQNHEKYQLTEEAPKQPTSGSLFLFNKRVLRFFRRDGHNWRKKRDGRTVGEAHERLKVGNAEALNCYYAHGEHNPNFQR 107 55599**************************************************************************************** PP CG-1 97 rcywlLeeelekivlvhyle 116 r+yw+L+++ ++ivlvhy++ XP_022954084.1 108 RSYWMLDQSCDHIVLVHYRD 127 ****************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 944 aa Download sequence
MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF 60 FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI 120 VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHSLSPGSV EVSSETGNRT 180 IGSNGVDRQY EKSELKSSND RDVSQALRRI EEQLSLNEDS WKDIGPYYGH EEGSNFNLID 240 YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL 300 DSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRKWLDS GGIRSCTSPE YASPLDTHDD 360 NSNYHISFLK QDHGNSLEVD TSLIVAQVQK FTIRQIVPEQ GYATESTKVI IIGSFLCDPS 420 KAPWACMFGD IEVPLQVVQN GVLCFEAPPH LPGKVAFFIT SGNREPCSEV REFEYKMNVC 480 SHCQSHSSGA TKSPEELLLL VRLVQLLLSD SLMQKFDEVD SEVRSNNLKA GDDQWSSLIE 540 ALLVGSETPS GTMDWLLQEL LKDKLYLWLS SQKKDRHDLA GCSLSKKEQG VIHMISGLGY 600 VWALNPILSC GVNINFRDIN GWTALHWAAR FGREKMVAAL IASGASAGAV TDPSSQDRDG 660 KTAASIADIH GHKGLAGYLS EVALTSHLSS LTFEEGELSN GSAEIEAEIT VNCISKGNLS 720 SAEDCIPLKN TLAAVRNAAQ AAARIQSAFR AHSFRKRQQK EATFAACIDE YGIDPNDIQG 780 LLAMSKLNFS NRRDYNAAAL SIQKKYRGWK GRREFLSMRQ KVVKIQAHVR GYQARKHHKI 840 ICWAVGILDK AVLRWRRKGV GLRGFRSEIG SIDESEDGDI IKVFRKQKVE GTIDEAVSRV 900 LSMVDSPDAC QQYHRMLEGF REAKAKLDGT GNESAESTCL SDGF

Sequence ? help Back to Top

Protein Sequence Length: 944 aa Download sequence

MMNDGYDVSD LYREAQTRWL KPPEVLFILQ NHEKYQLTEE APKQPTSGSL FLFNKRVLRF  60
FRRDGHNWRK KRDGRTVGEA HERLKVGNAE ALNCYYAHGE HNPNFQRRSY WMLDQSCDHI  120
VLVHYRDISE GRSGAESVPQ LSPASASSSG SYPSQNHALE YQHSLSPGSV EVSSETGNRT  180
IGSNGVDRQY EKSELKSSND RDVSQALRRI EEQLSLNEDS WKDIGPYYGH EEGSNFNLID  240
YYEMSIEDQF SVLQHPENAV HDNSYTSFEM QDASGKHNRY DMAHEFIFGG EGTRPWGDAL  300
DSSKTTVLES QDRHSLLWNE NENPSSSSTV DNEHRKWLDS GGIRSCTSPE YASPLDTHDD  360
NSNYHISFLK QDHGNSLEVD TSLIVAQVQK FTIRQIVPEQ GYATESTKVI IIGSFLCDPS  420
KAPWACMFGD IEVPLQVVQN GVLCFEAPPH LPGKVAFFIT SGNREPCSEV REFEYKMNVC  480
SHCQSHSSGA TKSPEELLLL VRLVQLLLSD SLMQKFDEVD SEVRSNNLKA GDDQWSSLIE  540
ALLVGSETPS GTMDWLLQEL LKDKLYLWLS SQKKDRHDLA GCSLSKKEQG VIHMISGLGY  600
VWALNPILSC GVNINFRDIN GWTALHWAAR FGREKMVAAL IASGASAGAV TDPSSQDRDG  660
KTAASIADIH GHKGLAGYLS EVALTSHLSS LTFEEGELSN GSAEIEAEIT VNCISKGNLS  720
SAEDCIPLKN TLAAVRNAAQ AAARIQSAFR AHSFRKRQQK EATFAACIDE YGIDPNDIQG  780
LLAMSKLNFS NRRDYNAAAL SIQKKYRGWK GRREFLSMRQ KVVKIQAHVR GYQARKHHKI  840
ICWAVGILDK AVLRWRRKGV GLRGFRSEIG SIDESEDGDI IKVFRKQKVE GTIDEAVSRV  900
LSMVDSPDAC QQYHRMLEGF REAKAKLDGT GNESAESTCL SDGF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67310.1	0.0	CAMTA family protein