PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022954068.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family C3H
Protein Properties Length: 359aa    MW: 40195.4 Da    PI: 7.7665
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022954068.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH18.73.2e-06326226
                    -S---SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  2 ktelCrffartGtCkyGdrCkFaHg 26
                    k++lC++f+  G C  G+ C F+H+
  XP_022954068.1  3 KRVLCKYFSH-GACLKGEYCEFSHD 26
                    99****9999.*************5 PP

2zf-CCCH25.32.7e-083454526
                    --SGGGGTS--TTTTT-SS-SS CS
         zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                     C ++++ G C +G+rC++ H+
  XP_022954068.1 34 VCTYYQK-GRCAFGSRCRYDHV 54
                    6******.*************7 PP

Sequence ? help Back to Top
Protein Sequence    Length: 359 aa     Download sequence    
MSKRVLCKYF SHGACLKGEY CEFSHDWSAP PSNVCTYYQK GRCAFGSRCR YDHVKVSQAE  60
SSASSNSQQP HVSESVSIAH PLLSRPLSPL PGSTSELAGS KISCPPSHVQ IVWSGESEHP  120
DGLDDWRNGE TRIVGPADIP ICSFAAAGSD CPRGQNCPHI HGDLCPTCGK QCLHPSRTDE  180
REEHIKACEK KQKHLESLKR SQDIECSVCL ERVLSKTEIA ERKFGLLSEC DHPFCISCIR  240
NWRNTSSTSG MDVNSALRAC PICRKLSYFV IPSVIWYSSK EEKQEIVDSY KSRLRSIDCK  300
HFNFGNGNCP FGSSCFYKHA HWDGRLEEIT LRHIGNQDGL TVIAKNIRLS EFLSDLHIR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196201ESLKRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G08505.11e-155C3H family protein