PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022953926.1
Organism
Cucurbita moschata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Cucurbitales; Cucurbitaceae; Cucurbiteae; Cucurbita
Family bHLH
Protein Properties Length: 177aa    MW: 19235.9 Da    PI: 9.9915
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022953926.1genomeNCBIView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.80.00011751131255
                     HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
             HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                     R +++ +++  L +++ +      +K + a++L +A+ YI+ Lq
  XP_022953926.1  75 RKEKLVDRITALHQIVSPF-----GKTDTASVLSEAIGYIRFLQ 113
                     6677778999999999887.....8******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 177 aa     Download sequence    
MMGGNPNWWT TSLAEQPQTW SQFVMSNRVV SGSGGGGPDP DRSLESNRSA VVGGGACKKA  60
RVHPPSSTQP PLKVRKEKLV DRITALHQIV SPFGKTDTAS VLSEAIGYIR FLQGQIEALS  120
YPYLRSAPKE LTNSQPLGDE RKRQEKPLKE LRSRGLCLVP LSCTHLLGAD TTYGTGF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G29100.15e-40bHLH family protein